Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 EEF1DP4-201ENST00000446006 880 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 PHKG1P2-201ENST00000457537 863 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 RARRES2P8-201ENST00000566335 367 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 Z83851.2-201ENST00000609564 659 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 AJ011931.1-201ENST00000618749 2492 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 AL031008.1-201ENST00000619963 541 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 AL691432.3-201ENST00000621860 400 ntBASIC17.17■□□□□ 0.34
CNGA4Q8IV77 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.17■□□□□ 0.34
CNGA4Q8IV77 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 KRT18P56-201ENST00000507275 550 ntBASIC17.16■□□□□ 0.34
CNGA4Q8IV77 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNGA4Q8IV77 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 MIR600HG-201ENST00000449175 5984 ntBASIC17.15■□□□□ 0.34
CNGA4Q8IV77 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 AC112191.1-201ENST00000523689 701 ntBASIC17.15■□□□□ 0.34
CNGA4Q8IV77 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 AC018845.2-201ENST00000568326 409 ntBASIC17.15■□□□□ 0.34
CNGA4Q8IV77 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNGA4Q8IV77 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms