Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AL596442.2-201ENST00000610240 980 ntBASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE8Q86YQ8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AL080243.2-201ENST00000418783 582 ntBASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AL079307.3-201ENST00000556114 283 ntBASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 AC126365.1-201ENST00000578585 1514 ntBASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE8Q86YQ8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 CNN2P11-201ENST00000429351 262 ntBASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE8Q86YQ8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms