Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.65□□□□□ -0.06
TUBA1AQ71U36 AP001350.2-201ENST00000625104 1094 ntBASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TUBA1AQ71U36 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MCCD1P2-201ENST00000423228 335 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 GPX1P2-201ENST00000429271 606 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MTDHP5-201ENST00000598980 586 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 AC091812.2-201ENST00000619081 385 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 KRT8P39-201ENST00000396270 1433 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 LINC00552-201ENST00000625151 2579 ntBASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TUBA1AQ71U36 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TUBA1AQ71U36 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms