Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 RARRES2P9-201ENST00000565168 469 ntBASIC14.41□□□□□ -0.1
NIPAL3Q6P499 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AC027612.4-201ENST00000605371 583 ntBASIC14.41□□□□□ -0.1
NIPAL3Q6P499 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 AC112693.3-201ENST00000624819 1983 ntBASIC14.41□□□□□ -0.1
NIPAL3Q6P499 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NIPAL3Q6P499 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 TCAF2P1-201ENST00000291129 2421 ntBASIC14.4□□□□□ -0.1
NIPAL3Q6P499 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AC061975.2-201ENST00000581722 295 ntBASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 C18orf15-201ENST00000623680 2534 ntBASIC14.4□□□□□ -0.1
NIPAL3Q6P499 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NIPAL3Q6P499 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 GPS2P2-201ENST00000430745 888 ntBASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.39□□□□□ -0.11
NIPAL3Q6P499 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms