Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL54Q6P161 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL54Q6P161 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL54Q6P161 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL54Q6P161 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL54Q6P161 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL54Q6P161 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.97□□□□□ -0.49
MRPL54Q6P161 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 CICP17-201ENST00000418553 2377 ntBASIC11.97□□□□□ -0.49
MRPL54Q6P161 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AP001350.2-201ENST00000625104 1094 ntBASIC11.97□□□□□ -0.49
MRPL54Q6P161 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 BX640514.1-201ENST00000583223 1918 ntBASIC11.97□□□□□ -0.49
MRPL54Q6P161 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
MRPL54Q6P161 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
MRPL54Q6P161 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 REXO1L2P-201ENST00000425429 2069 ntBASIC11.96□□□□□ -0.49
MRPL54Q6P161 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 CICP8-201ENST00000455800 2813 ntBASIC11.96□□□□□ -0.49
MRPL54Q6P161 MMP23A-201ENST00000234610 1017 ntBASIC11.96□□□□□ -0.49
MRPL54Q6P161 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.96□□□□□ -0.49
MRPL54Q6P161 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
MRPL54Q6P161 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms