Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LTBQ06643 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.44□□□□□ -0.1
LTBQ06643 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 AC013268.4-201ENST00000637413 2228 ntBASIC14.43□□□□□ -0.1
LTBQ06643 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LTBQ06643 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 FAM207CP-201ENST00000443486 507 ntBASIC14.43□□□□□ -0.1
LTBQ06643 AL139010.1-201ENST00000454878 894 ntBASIC14.43□□□□□ -0.1
LTBQ06643 ALG1L8P-201ENST00000533887 760 ntBASIC14.43□□□□□ -0.1
LTBQ06643 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 CR383656.12-201ENST00000549567 513 ntBASIC14.43□□□□□ -0.1
LTBQ06643 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.43□□□□□ -0.1
LTBQ06643 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.43□□□□□ -0.1
LTBQ06643 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.43□□□□□ -0.1
LTBQ06643 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.43□□□□□ -0.1
LTBQ06643 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.43□□□□□ -0.1
LTBQ06643 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 AC027307.3-201ENST00000594262 1100 ntBASIC14.43□□□□□ -0.1
LTBQ06643 LINC02560-201ENST00000596379 459 ntBASIC14.43□□□□□ -0.1
LTBQ06643 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.43□□□□□ -0.1
LTBQ06643 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.43□□□□□ -0.1
LTBQ06643 AC008761.3-201ENST00000624803 892 ntBASIC14.43□□□□□ -0.1
LTBQ06643 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.43□□□□□ -0.1
LTBQ06643 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
LTBQ06643 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
LTBQ06643 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LTBQ06643 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 PPT1-215ENST00000641471 2368 ntBASIC14.42□□□□□ -0.1
LTBQ06643 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 AC092127.1-201ENST00000567093 3455 ntBASIC14.42□□□□□ -0.1
LTBQ06643 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 AC020658.6-201ENST00000623564 1870 ntBASIC14.42□□□□□ -0.1
LTBQ06643 AC136621.1-201ENST00000624017 2304 ntBASIC14.42□□□□□ -0.1
LTBQ06643 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LTBQ06643 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.42□□□□□ -0.1
LTBQ06643 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LTBQ06643 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LTBQ06643 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms