Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.69□□□□□ -0.06
RUNX1T1Q06455 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 MIR3197-201ENST00000582241 73 ntBASIC14.69□□□□□ -0.06
RUNX1T1Q06455 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AL009183.1-201ENST00000603760 355 ntBASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AL513190.1-201ENST00000621254 727 ntBASIC14.69□□□□□ -0.06
RUNX1T1Q06455 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
RUNX1T1Q06455 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RUNX1T1Q06455 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SNX18-202ENST00000343017 3140 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 AC106730.1-201ENST00000566722 1090 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 AC092865.6-201ENST00000642101 219 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 ZNF259P1-201ENST00000407656 1365 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.68□□□□□ -0.06
RUNX1T1Q06455 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RUNX1T1Q06455 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RUNX1T1Q06455 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms