Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 RPL13AP23-201ENST00000480739 586 ntBASIC12.16□□□□□ -0.46
HIST1H1AQ02539 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC034105.1-201ENST00000563488 319 ntBASIC12.16□□□□□ -0.46
HIST1H1AQ02539 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC068137.2-201ENST00000605408 478 ntBASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AL161645.1-201ENST00000622716 1255 ntBASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.16□□□□□ -0.46
HIST1H1AQ02539 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 WASH6P-202ENST00000359512 1437 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AC092474.2-201ENST00000424288 719 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 RNA5SP416-201ENST00000516838 111 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AC145285.3-201ENST00000564603 959 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AL365330.1-201ENST00000607459 531 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AL359183.1-201ENST00000623796 2132 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 ZNF259P1-201ENST00000407656 1365 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.15□□□□□ -0.46
HIST1H1AQ02539 AC073439.1-201ENST00000624121 1774 ntBASIC12.15□□□□□ -0.46
HIST1H1AQ02539 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
HIST1H1AQ02539 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
HIST1H1AQ02539 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
HIST1H1AQ02539 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 TMBIM7P-203ENST00000641617 1718 ntBASIC12.14□□□□□ -0.47
HIST1H1AQ02539 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.14□□□□□ -0.47
HIST1H1AQ02539 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms