Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.51■□□□□ 0.23
IRX4P78413 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
IRX4P78413 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IRX4P78413 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.5■□□□□ 0.23
IRX4P78413 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 AC092384.3-202ENST00000564646 2873 ntBASIC16.5■□□□□ 0.23
IRX4P78413 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
IRX4P78413 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 IGHV3-71-201ENST00000523324 359 ntBASIC16.5■□□□□ 0.23
IRX4P78413 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 RARRES2P9-201ENST00000565168 469 ntBASIC16.5■□□□□ 0.23
IRX4P78413 MIR4492-201ENST00000581627 80 ntBASIC16.5■□□□□ 0.23
IRX4P78413 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.5■□□□□ 0.23
IRX4P78413 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.5■□□□□ 0.23
IRX4P78413 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.5■□□□□ 0.23
IRX4P78413 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
IRX4P78413 AP3S2-216ENST00000617003 1561 ntBASIC16.5■□□□□ 0.23
IRX4P78413 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.5■□□□□ 0.23
IRX4P78413 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.5■□□□□ 0.23
IRX4P78413 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
IRX4P78413 SLC22A20-204ENST00000530038 1673 ntBASIC16.5■□□□□ 0.23
IRX4P78413 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
IRX4P78413 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.49■□□□□ 0.23
IRX4P78413 TP53TG3HP-202ENST00000569755 579 ntBASIC16.49■□□□□ 0.23
IRX4P78413 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
IRX4P78413 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.49■□□□□ 0.23
IRX4P78413 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
IRX4P78413 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
IRX4P78413 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 PCGF3-213ENST00000620529 1899 ntBASIC16.48■□□□□ 0.23
IRX4P78413 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.48■□□□□ 0.23
IRX4P78413 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.48■□□□□ 0.23
IRX4P78413 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
IRX4P78413 AC131009.4-201ENST00000624048 1740 ntBASIC16.48■□□□□ 0.23
IRX4P78413 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.48■□□□□ 0.23
IRX4P78413 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.48■□□□□ 0.23
IRX4P78413 GPR53P-205ENST00000457298 1084 ntBASIC16.48■□□□□ 0.23
IRX4P78413 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.48■□□□□ 0.23
IRX4P78413 MIR3909-201ENST00000579518 119 ntBASIC16.48■□□□□ 0.23
IRX4P78413 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.48■□□□□ 0.23
IRX4P78413 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.48■□□□□ 0.23
IRX4P78413 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.48■□□□□ 0.23
IRX4P78413 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.48■□□□□ 0.23
IRX4P78413 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
IRX4P78413 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
IRX4P78413 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms