Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
UBA52P62987 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBA52P62987 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.72□□□□□ -0.21
UBA52P62987 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.71□□□□□ -0.21
UBA52P62987 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
UBA52P62987 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.71□□□□□ -0.21
UBA52P62987 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.71□□□□□ -0.21
UBA52P62987 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.71□□□□□ -0.21
UBA52P62987 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.71□□□□□ -0.21
UBA52P62987 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.71□□□□□ -0.21
UBA52P62987 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.71□□□□□ -0.21
UBA52P62987 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.71□□□□□ -0.21
UBA52P62987 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBA52P62987 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.71□□□□□ -0.21
UBA52P62987 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
UBA52P62987 AC016027.1-202ENST00000607927 1699 ntBASIC13.71□□□□□ -0.21
UBA52P62987 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBA52P62987 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBA52P62987 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBA52P62987 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.71□□□□□ -0.22
UBA52P62987 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBA52P62987 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.71□□□□□ -0.22
UBA52P62987 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.71□□□□□ -0.22
UBA52P62987 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBA52P62987 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBA52P62987 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBA52P62987 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.71□□□□□ -0.22
UBA52P62987 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.7□□□□□ -0.22
UBA52P62987 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 ADH5P3-201ENST00000433842 1137 ntBASIC13.7□□□□□ -0.22
UBA52P62987 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 AC067863.1-201ENST00000494933 530 ntBASIC13.7□□□□□ -0.22
UBA52P62987 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.7□□□□□ -0.22
UBA52P62987 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 AC005498.2-205ENST00000593218 784 ntBASIC13.7□□□□□ -0.22
UBA52P62987 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.7□□□□□ -0.22
UBA52P62987 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 AC136621.1-201ENST00000624017 2304 ntBASIC13.7□□□□□ -0.22
UBA52P62987 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
UBA52P62987 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
UBA52P62987 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBA52P62987 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBA52P62987 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms