Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 AC093004.1-201ENST00000508850 424 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 SPDYE18-201ENST00000510091 1050 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.05■□□□□ 0.32
SNRPFP62306 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.05■□□□□ 0.32
SNRPFP62306 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.05■□□□□ 0.32
SNRPFP62306 AC104794.3-201ENST00000566840 1248 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 AC099568.2-201ENST00000609194 695 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
SNRPFP62306 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.05■□□□□ 0.32
SNRPFP62306 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNRPFP62306 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
SNRPFP62306 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNRPFP62306 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPFP62306 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPFP62306 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPFP62306 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 C18orf15-201ENST00000623680 2534 ntBASIC17.04■□□□□ 0.32
SNRPFP62306 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPFP62306 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.04■□□□□ 0.32
SNRPFP62306 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.04■□□□□ 0.32
SNRPFP62306 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRPFP62306 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 CICP6-201ENST00000457191 2729 ntBASIC17.04■□□□□ 0.32
SNRPFP62306 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SNRPFP62306 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRPFP62306 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRPFP62306 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.03■□□□□ 0.32
SNRPFP62306 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.03■□□□□ 0.32
SNRPFP62306 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
SNRPFP62306 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRPFP62306 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNRPFP62306 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.03■□□□□ 0.32
SNRPFP62306 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SNRPFP62306 AL589987.1-201ENST00000453380 819 ntBASIC17.03■□□□□ 0.32
SNRPFP62306 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNRPFP62306 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRPFP62306 SPCS2P1-201ENST00000561636 679 ntBASIC17.03■□□□□ 0.32
SNRPFP62306 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms