Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.91□□□□□ -0.18
SEC61A1P61619 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61A1P61619 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 SNX33P1-201ENST00000592116 1762 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61A1P61619 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 TFAMP1-201ENST00000412727 736 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 SPDYE11-202ENST00000450699 704 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 RARRES2P8-201ENST00000566335 367 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.9□□□□□ -0.18
SEC61A1P61619 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.9□□□□□ -0.18
SEC61A1P61619 SPDYE9P-201ENST00000570642 692 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 MIR4492-201ENST00000581627 80 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 AC004835.2-201ENST00000603762 682 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 SPDYE10P-202ENST00000612005 668 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 SPDYE8P-202ENST00000612377 668 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 AP001350.2-201ENST00000625104 1094 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 LINC00528-201ENST00000600723 2160 ntBASIC13.9□□□□□ -0.18
SEC61A1P61619 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SEC61A1P61619 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.9□□□□□ -0.18
SEC61A1P61619 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SEC61A1P61619 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.9□□□□□ -0.19
SEC61A1P61619 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.9□□□□□ -0.19
SEC61A1P61619 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
SEC61A1P61619 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
SEC61A1P61619 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.89□□□□□ -0.19
SEC61A1P61619 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SEC61A1P61619 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SEC61A1P61619 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SEC61A1P61619 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms