Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC004790.2-201ENST00000623588 572 ntBASIC14.49□□□□□ -0.09
CDC42P60953 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC42P60953 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDC42P60953 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CDC42P60953 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDC42P60953 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDC42P60953 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDC42P60953 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC42P60953 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.49□□□□□ -0.09
CDC42P60953 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42P60953 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDC42P60953 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 AC023024.2-201ENST00000623561 1993 ntBASIC14.48□□□□□ -0.09
CDC42P60953 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC42P60953 UPK3BP1-201ENST00000428678 509 ntBASIC14.48□□□□□ -0.09
CDC42P60953 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.48□□□□□ -0.09
CDC42P60953 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.48□□□□□ -0.09
CDC42P60953 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.48□□□□□ -0.09
CDC42P60953 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
CDC42P60953 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 AC091304.2-201ENST00000564639 760 ntBASIC14.48□□□□□ -0.09
CDC42P60953 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 AC008735.5-201ENST00000623544 497 ntBASIC14.48□□□□□ -0.09
CDC42P60953 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.48□□□□□ -0.09
CDC42P60953 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.48□□□□□ -0.09
CDC42P60953 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42P60953 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC42P60953 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.47□□□□□ -0.09
CDC42P60953 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 AC073648.2-201ENST00000510116 352 ntBASIC14.47□□□□□ -0.09
CDC42P60953 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42P60953 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDC42P60953 MIR3652-201ENST00000579335 131 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms