Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA3P59666 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.88□□□□□ -0.19
DEFA3P59666 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 CSPG4P11-201ENST00000560634 4910 ntBASIC13.88□□□□□ -0.19
DEFA3P59666 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.88□□□□□ -0.19
DEFA3P59666 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DEFA3P59666 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DEFA3P59666 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DEFA3P59666 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 AC131009.4-201ENST00000624048 1740 ntBASIC13.87□□□□□ -0.19
DEFA3P59666 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 MST1P2-201ENST00000457982 2291 ntBASIC13.87□□□□□ -0.19
DEFA3P59666 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 ZNF444P1-201ENST00000559497 298 ntBASIC13.87□□□□□ -0.19
DEFA3P59666 AC091167.2-201ENST00000579581 588 ntBASIC13.87□□□□□ -0.19
DEFA3P59666 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.87□□□□□ -0.19
DEFA3P59666 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 AC079602.3-201ENST00000623931 403 ntBASIC13.87□□□□□ -0.19
DEFA3P59666 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.87□□□□□ -0.19
DEFA3P59666 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
DEFA3P59666 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
DEFA3P59666 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.86□□□□□ -0.19
DEFA3P59666 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DEFA3P59666 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.86□□□□□ -0.19
DEFA3P59666 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.86□□□□□ -0.19
DEFA3P59666 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 MMP23A-201ENST00000234610 1017 ntBASIC13.86□□□□□ -0.19
DEFA3P59666 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.86□□□□□ -0.19
DEFA3P59666 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.86□□□□□ -0.19
DEFA3P59666 RNA5SP413-201ENST00000516373 109 ntBASIC13.86□□□□□ -0.19
DEFA3P59666 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.86□□□□□ -0.19
DEFA3P59666 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DEFA3P59666 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.86□□□□□ -0.19
DEFA3P59666 WASH6P-202ENST00000359512 1437 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms