Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL512384.1-201ENST00000406683 331 ntBASIC11.55□□□□□ -0.56
APOC4P55056 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 KRT18P43-201ENST00000469825 1281 ntBASIC11.55□□□□□ -0.56
APOC4P55056 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.55□□□□□ -0.56
APOC4P55056 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 AL158212.4-201ENST00000624062 1286 ntBASIC11.55□□□□□ -0.56
APOC4P55056 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
APOC4P55056 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.55□□□□□ -0.56
APOC4P55056 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.55□□□□□ -0.56
APOC4P55056 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
APOC4P55056 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.55□□□□□ -0.56
APOC4P55056 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.54□□□□□ -0.56
APOC4P55056 AL442647.2-201ENST00000429864 857 ntBASIC11.54□□□□□ -0.56
APOC4P55056 AL162726.2-201ENST00000438986 1017 ntBASIC11.54□□□□□ -0.56
APOC4P55056 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 FAM86LP-201ENST00000478302 853 ntBASIC11.54□□□□□ -0.56
APOC4P55056 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.54□□□□□ -0.56
APOC4P55056 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.54□□□□□ -0.56
APOC4P55056 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.54□□□□□ -0.56
APOC4P55056 AC133539.2-201ENST00000604757 467 ntBASIC11.54□□□□□ -0.56
APOC4P55056 AC004790.1-201ENST00000612686 536 ntBASIC11.54□□□□□ -0.56
APOC4P55056 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.54□□□□□ -0.56
APOC4P55056 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOC4P55056 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms