Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPAP53621 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.32■□□□□ 0.2
COPAP53621 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.32■□□□□ 0.2
COPAP53621 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
COPAP53621 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.32■□□□□ 0.2
COPAP53621 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.32■□□□□ 0.2
COPAP53621 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPAP53621 AL139010.1-201ENST00000454878 894 ntBASIC16.32■□□□□ 0.2
COPAP53621 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.32■□□□□ 0.2
COPAP53621 DOC2GP-202ENST00000514950 1163 ntBASIC16.32■□□□□ 0.2
COPAP53621 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.32■□□□□ 0.2
COPAP53621 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.32■□□□□ 0.2
COPAP53621 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.32■□□□□ 0.2
COPAP53621 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.32■□□□□ 0.2
COPAP53621 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.32■□□□□ 0.2
COPAP53621 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPAP53621 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
COPAP53621 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.32■□□□□ 0.2
COPAP53621 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.32■□□□□ 0.2
COPAP53621 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COPAP53621 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.32■□□□□ 0.2
COPAP53621 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COPAP53621 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 U82695.1-201ENST00000635752 1889 ntBASIC16.31■□□□□ 0.2
COPAP53621 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COPAP53621 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 SPDYE19P-201ENST00000338590 713 ntBASIC16.31■□□□□ 0.2
COPAP53621 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COPAP53621 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 DFFBP1-201ENST00000433250 979 ntBASIC16.31■□□□□ 0.2
COPAP53621 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.31■□□□□ 0.2
COPAP53621 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.31■□□□□ 0.2
COPAP53621 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.31■□□□□ 0.2
COPAP53621 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COPAP53621 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.31■□□□□ 0.2
COPAP53621 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COPAP53621 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.31■□□□□ 0.2
COPAP53621 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.3■□□□□ 0.2
COPAP53621 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 CU639417.3-201ENST00000624240 1404 ntBASIC16.3■□□□□ 0.2
COPAP53621 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COPAP53621 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COPAP53621 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.3■□□□□ 0.2
COPAP53621 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.3■□□□□ 0.2
COPAP53621 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.3■□□□□ 0.2
COPAP53621 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.3■□□□□ 0.2
COPAP53621 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.3■□□□□ 0.2
COPAP53621 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.3■□□□□ 0.2
COPAP53621 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
COPAP53621 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.3■□□□□ 0.2
COPAP53621 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COPAP53621 AC022532.1-201ENST00000624563 1728 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms