Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN2P51788 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 AC005252.3-201ENST00000623855 2258 ntBASIC15.36■□□□□ 0.05
CLCN2P51788 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLCN2P51788 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN2P51788 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 AC079781.5-202ENST00000641784 3743 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 BEND3P1-201ENST00000421591 1944 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 HLA-J-203ENST00000494367 1087 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 AC105233.2-201ENST00000523697 349 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 AF228730.5-201ENST00000530288 346 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 AC093520.2-201ENST00000561830 333 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN2P51788 LINC00628-201ENST00000628516 1289 ntBASIC15.35■□□□□ 0.05
CLCN2P51788 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCN2P51788 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN2P51788 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN2P51788 AC063926.3-201ENST00000624734 5658 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CLCN2P51788 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCN2P51788 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CLCN2P51788 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 AL592424.1-201ENST00000563624 1536 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC087481.3-201ENST00000602886 1894 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CLCN2P51788 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLCN2P51788 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 PRYP6-201ENST00000514804 343 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC025678.2-201ENST00000562061 970 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 AP000842.3-202ENST00000569238 1080 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.34■□□□□ 0.05
CLCN2P51788 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
CLCN2P51788 AC084121.4-201ENST00000641598 221 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 AF228730.8-201ENST00000642140 221 ntBASIC15.34■□□□□ 0.05
CLCN2P51788 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN2P51788 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms