Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.08■□□□□ 0.32
PDE6CP51160 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 CETN4P-206ENST00000642099 2168 ntBASIC17.08■□□□□ 0.32
PDE6CP51160 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PDE6CP51160 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PDE6CP51160 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PDE6CP51160 KRT8P37-201ENST00000451609 1420 ntBASIC17.07■□□□□ 0.32
PDE6CP51160 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6CP51160 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PDE6CP51160 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 AC190387.1-201ENST00000551683 408 ntBASIC17.07■□□□□ 0.32
PDE6CP51160 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.07■□□□□ 0.32
PDE6CP51160 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.07■□□□□ 0.32
PDE6CP51160 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6CP51160 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.07■□□□□ 0.32
PDE6CP51160 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.07■□□□□ 0.32
PDE6CP51160 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PDE6CP51160 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDE6CP51160 AC100757.3-201ENST00000622361 1406 ntBASIC17.06■□□□□ 0.32
PDE6CP51160 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6CP51160 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6CP51160 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.06■□□□□ 0.32
PDE6CP51160 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.06■□□□□ 0.32
PDE6CP51160 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.06■□□□□ 0.32
PDE6CP51160 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 AC138761.1-201ENST00000584393 385 ntBASIC17.06■□□□□ 0.32
PDE6CP51160 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.06■□□□□ 0.32
PDE6CP51160 SPDYE12P-201ENST00000618416 771 ntBASIC17.06■□□□□ 0.32
PDE6CP51160 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6CP51160 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PDE6CP51160 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PDE6CP51160 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.06■□□□□ 0.32
PDE6CP51160 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.06■□□□□ 0.32
PDE6CP51160 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PDE6CP51160 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 AC020658.6-201ENST00000623564 1870 ntBASIC17.05■□□□□ 0.32
PDE6CP51160 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PDE6CP51160 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.05■□□□□ 0.32
PDE6CP51160 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PDE6CP51160 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms