Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.15■□□□□ 0.02
HLCSP50747 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.15■□□□□ 0.02
HLCSP50747 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.15■□□□□ 0.02
HLCSP50747 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.15■□□□□ 0.02
HLCSP50747 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.15■□□□□ 0.02
HLCSP50747 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HLCSP50747 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
HLCSP50747 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HLCSP50747 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HLCSP50747 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.14■□□□□ 0.01
HLCSP50747 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.14■□□□□ 0.01
HLCSP50747 RARRES2P9-201ENST00000565168 469 ntBASIC15.14■□□□□ 0.01
HLCSP50747 AC140878.1-201ENST00000565277 250 ntBASIC15.14■□□□□ 0.01
HLCSP50747 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 AC005498.2-205ENST00000593218 784 ntBASIC15.14■□□□□ 0.01
HLCSP50747 SPTSSB-204ENST00000617024 1292 ntBASIC15.14■□□□□ 0.01
HLCSP50747 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 AP3S2-216ENST00000617003 1561 ntBASIC15.14■□□□□ 0.01
HLCSP50747 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.14■□□□□ 0.01
HLCSP50747 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HLCSP50747 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.14■□□□□ 0.01
HLCSP50747 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
HLCSP50747 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 AC055876.3-201ENST00000431496 288 ntBASIC15.13■□□□□ 0.01
HLCSP50747 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.13■□□□□ 0.01
HLCSP50747 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 AC098859.1-201ENST00000502915 1238 ntBASIC15.13■□□□□ 0.01
HLCSP50747 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.13■□□□□ 0.01
HLCSP50747 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.13■□□□□ 0.01
HLCSP50747 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HLCSP50747 AC138649.4-201ENST00000612222 287 ntBASIC15.13■□□□□ 0.01
HLCSP50747 AC018529.1-201ENST00000613063 361 ntBASIC15.13■□□□□ 0.01
HLCSP50747 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HLCSP50747 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 AC007191.1-201ENST00000623179 2995 ntBASIC15.13■□□□□ 0.01
HLCSP50747 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HLCSP50747 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms