Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.08□□□□□ -0.16
CSNK1A1P48729 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 FO538757.1-201ENST00000623083 1397 ntBASIC14.08□□□□□ -0.16
CSNK1A1P48729 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSNK1A1P48729 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.07□□□□□ -0.16
CSNK1A1P48729 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 AL080243.2-201ENST00000418783 582 ntBASIC14.07□□□□□ -0.16
CSNK1A1P48729 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 SPDYE12P-201ENST00000618416 771 ntBASIC14.07□□□□□ -0.16
CSNK1A1P48729 AC073592.8-201ENST00000624126 511 ntBASIC14.07□□□□□ -0.16
CSNK1A1P48729 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CSNK1A1P48729 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSNK1A1P48729 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.06□□□□□ -0.16
CSNK1A1P48729 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 AC068418.2-201ENST00000577309 3703 ntBASIC14.06□□□□□ -0.16
CSNK1A1P48729 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 AC140878.1-201ENST00000565277 250 ntBASIC14.06□□□□□ -0.16
CSNK1A1P48729 AC051619.7-201ENST00000568314 623 ntBASIC14.06□□□□□ -0.16
CSNK1A1P48729 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CSNK1A1P48729 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSNK1A1P48729 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms