Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SLC6A12P48065 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 AL596257.1-201ENST00000641463 2694 ntBASIC15.18■□□□□ 0.02
SLC6A12P48065 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC6A12P48065 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 AL133267.1-201ENST00000398220 340 ntBASIC15.17■□□□□ 0.02
SLC6A12P48065 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.17■□□□□ 0.02
SLC6A12P48065 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC009477.1-201ENST00000452936 217 ntBASIC15.17■□□□□ 0.02
SLC6A12P48065 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC044860.1-202ENST00000559481 777 ntBASIC15.17■□□□□ 0.02
SLC6A12P48065 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.17■□□□□ 0.02
SLC6A12P48065 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC6A12P48065 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC6A12P48065 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC6A12P48065 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 AC148477.4-201ENST00000613430 1793 ntBASIC15.16■□□□□ 0.02
SLC6A12P48065 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC6A12P48065 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.16■□□□□ 0.02
SLC6A12P48065 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SLC6A12P48065 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.16■□□□□ 0.02
SLC6A12P48065 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.16■□□□□ 0.02
SLC6A12P48065 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC6A12P48065 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms