Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SSR1P43307 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 CICP4-201ENST00000447359 2812 ntBASIC16.87■□□□□ 0.29
SSR1P43307 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SSR1P43307 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 KRT8P48-201ENST00000515599 1220 ntBASIC16.87■□□□□ 0.29
SSR1P43307 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
SSR1P43307 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 MCCD1P2-201ENST00000423228 335 ntBASIC16.86■□□□□ 0.29
SSR1P43307 AC079140.1-201ENST00000508039 487 ntBASIC16.86■□□□□ 0.29
SSR1P43307 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.86■□□□□ 0.29
SSR1P43307 AC243562.1-201ENST00000560672 389 ntBASIC16.86■□□□□ 0.29
SSR1P43307 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.86■□□□□ 0.29
SSR1P43307 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
SSR1P43307 C20orf181-201ENST00000623918 480 ntBASIC16.86■□□□□ 0.29
SSR1P43307 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SSR1P43307 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 AC011477.6-201ENST00000604980 1927 ntBASIC16.86■□□□□ 0.29
SSR1P43307 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SSR1P43307 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 FOXO1B-201ENST00000504678 1527 ntBASIC16.86■□□□□ 0.29
SSR1P43307 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SSR1P43307 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.86■□□□□ 0.29
SSR1P43307 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SSR1P43307 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.85■□□□□ 0.29
SSR1P43307 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSR1P43307 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.85■□□□□ 0.29
SSR1P43307 SPCS2P4-201ENST00000436160 681 ntBASIC16.85■□□□□ 0.29
SSR1P43307 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms