Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SLC1A1P43005 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 AP000344.2-201ENST00000512987 629 ntBASIC16.51■□□□□ 0.23
SLC1A1P43005 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC1A1P43005 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.51■□□□□ 0.23
SLC1A1P43005 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 MIR4469-201ENST00000583919 79 ntBASIC16.51■□□□□ 0.23
SLC1A1P43005 AC007967.4-201ENST00000614700 386 ntBASIC16.51■□□□□ 0.23
SLC1A1P43005 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SLC1A1P43005 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SLC1A1P43005 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SLC1A1P43005 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SLC1A1P43005 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 AC091951.1-201ENST00000512854 2465 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SLC1A1P43005 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
SLC1A1P43005 GPS2P2-201ENST00000430745 888 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 RBPMS2P1-201ENST00000437762 623 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC1A1P43005 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AC093520.2-201ENST00000561830 333 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC1A1P43005 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 RN7SL828P-201ENST00000607615 303 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 AL133215.2-201ENST00000609242 977 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 AC003101.2-201ENST00000612557 442 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 AGAP7P-201ENST00000582299 2062 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 AGAP14-201ENST00000624701 2060 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC1A1P43005 KRT8P12-202ENST00000472924 1397 ntBASIC16.5■□□□□ 0.23
SLC1A1P43005 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SLC1A1P43005 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A1P43005 AC023024.2-201ENST00000623561 1993 ntBASIC16.49■□□□□ 0.23
SLC1A1P43005 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC1A1P43005 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SLC1A1P43005 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.49■□□□□ 0.23
SLC1A1P43005 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A1P43005 SPDYE14P-201ENST00000442619 822 ntBASIC16.49■□□□□ 0.23
SLC1A1P43005 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC1A1P43005 AC004835.2-201ENST00000603762 682 ntBASIC16.49■□□□□ 0.23
SLC1A1P43005 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A1P43005 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.49■□□□□ 0.23
SLC1A1P43005 LINC01101-201ENST00000622953 1884 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms