Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HNF4AP41235 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.35■□□□□ 0.05
HNF4AP41235 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HNF4AP41235 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 AL035456.1-201ENST00000456064 1369 ntBASIC15.35■□□□□ 0.05
HNF4AP41235 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.35■□□□□ 0.05
HNF4AP41235 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HNF4AP41235 AP002414.2-201ENST00000591780 3365 ntBASIC15.35■□□□□ 0.05
HNF4AP41235 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.34■□□□□ 0.05
HNF4AP41235 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.34■□□□□ 0.05
HNF4AP41235 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.34■□□□□ 0.05
HNF4AP41235 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 AL512356.2-201ENST00000546955 174 ntBASIC15.34■□□□□ 0.05
HNF4AP41235 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.34■□□□□ 0.05
HNF4AP41235 BANF1P1-201ENST00000553684 263 ntBASIC15.34■□□□□ 0.05
HNF4AP41235 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.34■□□□□ 0.05
HNF4AP41235 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.34■□□□□ 0.05
HNF4AP41235 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 TUBB3P1-201ENST00000405796 1332 ntBASIC15.34■□□□□ 0.05
HNF4AP41235 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HNF4AP41235 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.34■□□□□ 0.05
HNF4AP41235 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HNF4AP41235 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HNF4AP41235 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HNF4AP41235 AC126177.1-201ENST00000547829 2218 ntBASIC15.33■□□□□ 0.05
HNF4AP41235 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HNF4AP41235 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.33■□□□□ 0.05
HNF4AP41235 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
HNF4AP41235 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HNF4AP41235 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
HNF4AP41235 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.33■□□□□ 0.05
HNF4AP41235 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HNF4AP41235 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HNF4AP41235 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HNF4AP41235 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.33■□□□□ 0.04
HNF4AP41235 AC105250.1-201ENST00000509378 2057 ntBASIC15.33■□□□□ 0.04
HNF4AP41235 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.33■□□□□ 0.04
HNF4AP41235 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.33■□□□□ 0.04
HNF4AP41235 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HNF4AP41235 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HNF4AP41235 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.33■□□□□ 0.04
HNF4AP41235 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HNF4AP41235 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HNF4AP41235 SPDYE17-201ENST00000412399 783 ntBASIC15.33■□□□□ 0.04
HNF4AP41235 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.33■□□□□ 0.04
HNF4AP41235 CNN2P2-201ENST00000443536 909 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms