Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.74■□□□□ 0.75
COL15A1P39059 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.74■□□□□ 0.75
COL15A1P39059 RNA5SP423-201ENST00000517127 109 ntBASIC19.74■□□□□ 0.75
COL15A1P39059 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.74■□□□□ 0.75
COL15A1P39059 AP006547.1-201ENST00000563435 692 ntBASIC19.74■□□□□ 0.75
COL15A1P39059 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.74■□□□□ 0.75
COL15A1P39059 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC19.74■□□□□ 0.75
COL15A1P39059 ECM1P1-201ENST00000604092 1279 ntBASIC19.74■□□□□ 0.75
COL15A1P39059 BX539320.1-201ENST00000623759 877 ntBASIC19.74■□□□□ 0.75
COL15A1P39059 AC006453.4-201ENST00000636949 1252 ntBASIC19.74■□□□□ 0.75
COL15A1P39059 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.74■□□□□ 0.75
COL15A1P39059 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
COL15A1P39059 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
COL15A1P39059 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.74■□□□□ 0.75
COL15A1P39059 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL15A1P39059 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL15A1P39059 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.73■□□□□ 0.75
COL15A1P39059 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.73■□□□□ 0.75
COL15A1P39059 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.73■□□□□ 0.75
COL15A1P39059 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 AC091804.1-201ENST00000486888 567 ntBASIC19.73■□□□□ 0.75
COL15A1P39059 RPSAP36-202ENST00000494591 1261 ntBASIC19.73■□□□□ 0.75
COL15A1P39059 RNA5SP486-201ENST00000515961 83 ntBASIC19.73■□□□□ 0.75
COL15A1P39059 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 ACTG1P17-201ENST00000558391 1119 ntBASIC19.73■□□□□ 0.75
COL15A1P39059 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 AC132938.4-201ENST00000623835 848 ntBASIC19.73■□□□□ 0.75
COL15A1P39059 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.73■□□□□ 0.75
COL15A1P39059 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
COL15A1P39059 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COL15A1P39059 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COL15A1P39059 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL15A1P39059 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.73■□□□□ 0.75
COL15A1P39059 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.72■□□□□ 0.75
COL15A1P39059 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
COL15A1P39059 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COL15A1P39059 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL15A1P39059 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.72■□□□□ 0.75
COL15A1P39059 HOMER2P2-201ENST00000451621 847 ntBASIC19.72■□□□□ 0.75
COL15A1P39059 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.72■□□□□ 0.75
COL15A1P39059 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.72■□□□□ 0.75
COL15A1P39059 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 AL513523.2-202ENST00000427283 2040 ntBASIC19.72■□□□□ 0.75
COL15A1P39059 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.72■□□□□ 0.75
COL15A1P39059 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.72■□□□□ 0.75
COL15A1P39059 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL15A1P39059 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
COL15A1P39059 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COL15A1P39059 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 SLC25A24P2-201ENST00000415059 510 ntBASIC19.71■□□□□ 0.75
COL15A1P39059 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.71■□□□□ 0.75
COL15A1P39059 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.71■□□□□ 0.75
COL15A1P39059 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
COL15A1P39059 AL096828.3-201ENST00000615354 462 ntBASIC19.71■□□□□ 0.75
COL15A1P39059 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.71■□□□□ 0.75
COL15A1P39059 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
COL15A1P39059 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
COL15A1P39059 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
COL15A1P39059 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL15A1P39059 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms