Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN6P29350 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.99□□□□□ -0.01
PTPN6P29350 AC097359.3-201ENST00000603982 1210 ntBASIC14.99□□□□□ -0.01
PTPN6P29350 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.99□□□□□ -0.01
PTPN6P29350 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PTPN6P29350 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PTPN6P29350 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.99□□□□□ -0.01
PTPN6P29350 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
PTPN6P29350 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.98□□□□□ -0.01
PTPN6P29350 RBPMS2P1-201ENST00000437762 623 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.98□□□□□ -0.01
PTPN6P29350 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.98□□□□□ -0.01
PTPN6P29350 AC004449.1-201ENST00000564240 433 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 AL450472.2-201ENST00000603663 1156 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 AC093028.1-201ENST00000622998 982 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 AP002414.2-201ENST00000591780 3365 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 KRT8P37-201ENST00000451609 1420 ntBASIC14.98□□□□□ -0.01
PTPN6P29350 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PTPN6P29350 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PTPN6P29350 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.98□□□□□ -0.01
PTPN6P29350 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 PHKG1P2-201ENST00000457537 863 ntBASIC14.97□□□□□ -0.01
PTPN6P29350 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.97□□□□□ -0.01
PTPN6P29350 RNA5SP410-201ENST00000516285 106 ntBASIC14.97□□□□□ -0.01
PTPN6P29350 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 HNRNPUP1-201ENST00000554987 333 ntBASIC14.97□□□□□ -0.01
PTPN6P29350 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.97□□□□□ -0.01
PTPN6P29350 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PTPN6P29350 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PTPN6P29350 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.97□□□□□ -0.01
PTPN6P29350 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms