Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ABCD3P28288 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.55□□□□□ -0.08
ABCD3P28288 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 AC236430.1-201ENST00000402231 743 ntBASIC14.54□□□□□ -0.08
ABCD3P28288 AC015922.1-201ENST00000421102 1152 ntBASIC14.54□□□□□ -0.08
ABCD3P28288 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.54□□□□□ -0.08
ABCD3P28288 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
ABCD3P28288 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ABCD3P28288 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 LINC02560-201ENST00000596379 459 ntBASIC14.54□□□□□ -0.08
ABCD3P28288 AC008761.3-201ENST00000624803 892 ntBASIC14.54□□□□□ -0.08
ABCD3P28288 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.54□□□□□ -0.08
ABCD3P28288 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.54□□□□□ -0.08
ABCD3P28288 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ABCD3P28288 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ABCD3P28288 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
ABCD3P28288 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ABCD3P28288 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.53□□□□□ -0.08
ABCD3P28288 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 KRT18P64-201ENST00000434946 1219 ntBASIC14.53□□□□□ -0.08
ABCD3P28288 SPTLC1P1-201ENST00000447199 261 ntBASIC14.53□□□□□ -0.08
ABCD3P28288 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.53□□□□□ -0.08
ABCD3P28288 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 DOC2GP-202ENST00000514950 1163 ntBASIC14.53□□□□□ -0.08
ABCD3P28288 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCD3P28288 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCD3P28288 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCD3P28288 AC092127.1-201ENST00000567093 3455 ntBASIC14.53□□□□□ -0.08
ABCD3P28288 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.52□□□□□ -0.08
ABCD3P28288 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.52□□□□□ -0.08
ABCD3P28288 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.52□□□□□ -0.08
ABCD3P28288 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.52□□□□□ -0.08
ABCD3P28288 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.52□□□□□ -0.08
ABCD3P28288 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCD3P28288 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ABCD3P28288 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms