Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VARSP26640 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
VARSP26640 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.6■□□□□ 0.09
VARSP26640 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.6■□□□□ 0.09
VARSP26640 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VARSP26640 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
VARSP26640 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 AP3S2-216ENST00000617003 1561 ntBASIC15.59■□□□□ 0.09
VARSP26640 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 AL627223.1-201ENST00000416693 442 ntBASIC15.59■□□□□ 0.09
VARSP26640 AC245100.5-201ENST00000452108 331 ntBASIC15.59■□□□□ 0.09
VARSP26640 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.59■□□□□ 0.09
VARSP26640 AL512356.2-201ENST00000546955 174 ntBASIC15.59■□□□□ 0.09
VARSP26640 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 AC024267.1-201ENST00000582320 895 ntBASIC15.59■□□□□ 0.09
VARSP26640 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 AC005498.2-205ENST00000593218 784 ntBASIC15.59■□□□□ 0.09
VARSP26640 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 AC084121.4-201ENST00000641598 221 ntBASIC15.59■□□□□ 0.09
VARSP26640 AF228730.8-201ENST00000642140 221 ntBASIC15.59■□□□□ 0.09
VARSP26640 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
VARSP26640 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.59■□□□□ 0.09
VARSP26640 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.59■□□□□ 0.09
VARSP26640 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VARSP26640 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARSP26640 FLJ16779-201ENST00000612722 7638 ntBASIC15.58■□□□□ 0.09
VARSP26640 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARSP26640 AP002414.2-201ENST00000591780 3365 ntBASIC15.58■□□□□ 0.09
VARSP26640 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.58■□□□□ 0.09
VARSP26640 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VARSP26640 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 FAM220BP-201ENST00000377689 816 ntBASIC15.58■□□□□ 0.08
VARSP26640 KRT18P32-201ENST00000424695 1287 ntBASIC15.58■□□□□ 0.08
VARSP26640 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.58■□□□□ 0.08
VARSP26640 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.58■□□□□ 0.08
VARSP26640 TERF1P3-201ENST00000505638 1227 ntBASIC15.58■□□□□ 0.08
VARSP26640 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 AC109322.1-201ENST00000524499 1264 ntBASIC15.58■□□□□ 0.08
VARSP26640 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.58■□□□□ 0.08
VARSP26640 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.58■□□□□ 0.08
VARSP26640 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.58■□□□□ 0.08
VARSP26640 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 PPT1-215ENST00000641471 2368 ntBASIC15.58■□□□□ 0.08
VARSP26640 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 AC134407.2-201ENST00000625089 1978 ntBASIC15.58■□□□□ 0.08
VARSP26640 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.58■□□□□ 0.08
VARSP26640 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VARSP26640 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VARSP26640 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
VARSP26640 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VARSP26640 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.57■□□□□ 0.08
VARSP26640 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.57■□□□□ 0.08
VARSP26640 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms