Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH3P22223 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH3P22223 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH3P22223 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH3P22223 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 UGT1A2P-201ENST00000454886 866 ntBASIC15.54■□□□□ 0.08
CDH3P22223 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 LINC02084-201ENST00000606069 1096 ntBASIC15.54■□□□□ 0.08
CDH3P22223 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CDH3P22223 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH3P22223 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH3P22223 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH3P22223 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH3P22223 AC022144.1-201ENST00000602255 1580 ntBASIC15.53■□□□□ 0.08
CDH3P22223 AC138035.3-201ENST00000622706 2791 ntBASIC15.53■□□□□ 0.08
CDH3P22223 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 AC087499.5-201ENST00000452760 1342 ntBASIC15.53■□□□□ 0.08
CDH3P22223 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH3P22223 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH3P22223 AL080243.2-201ENST00000418783 582 ntBASIC15.53■□□□□ 0.08
CDH3P22223 TSSK5P-201ENST00000423978 907 ntBASIC15.53■□□□□ 0.08
CDH3P22223 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 SERBP1P3-201ENST00000459980 809 ntBASIC15.53■□□□□ 0.08
CDH3P22223 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH3P22223 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH3P22223 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.53■□□□□ 0.08
CDH3P22223 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH3P22223 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH3P22223 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 AC006058.4-201ENST00000624016 1670 ntBASIC15.53■□□□□ 0.08
CDH3P22223 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH3P22223 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH3P22223 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH3P22223 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH3P22223 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH3P22223 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH3P22223 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CDH3P22223 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH3P22223 AC236430.1-201ENST00000402231 743 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms