Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC087499.5-201ENST00000452760 1342 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL162727.3-201ENST00000635661 2787 ntBASIC15.92■□□□□ 0.14
HLA-DPA1P20036 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC127383.1-201ENST00000444697 1800 ntBASIC15.92■□□□□ 0.14
HLA-DPA1P20036 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 TMBIM7P-203ENST00000641617 1718 ntBASIC15.92■□□□□ 0.14
HLA-DPA1P20036 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC010336.2-201ENST00000564226 506 ntBASIC15.92■□□□□ 0.14
HLA-DPA1P20036 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DPA1P20036 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC087481.3-201ENST00000602886 1894 ntBASIC15.91■□□□□ 0.14
HLA-DPA1P20036 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 ZNF890P-202ENST00000530367 1156 ntBASIC15.91■□□□□ 0.14
HLA-DPA1P20036 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 AC090616.6-203ENST00000579186 1945 ntBASIC15.91■□□□□ 0.14
HLA-DPA1P20036 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DPA1P20036 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms