Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.04■□□□□ 0.16
NFKB1P19838 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.04■□□□□ 0.16
NFKB1P19838 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.04■□□□□ 0.16
NFKB1P19838 AC074338.1-201ENST00000416825 156 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 FAM86GP-201ENST00000448322 971 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.04■□□□□ 0.16
NFKB1P19838 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.04■□□□□ 0.16
NFKB1P19838 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.04■□□□□ 0.16
NFKB1P19838 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.04■□□□□ 0.16
NFKB1P19838 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NFKB1P19838 AL512361.1-201ENST00000554200 418 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.04■□□□□ 0.16
NFKB1P19838 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.04■□□□□ 0.16
NFKB1P19838 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NFKB1P19838 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 AC112693.3-201ENST00000624819 1983 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NFKB1P19838 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.04■□□□□ 0.16
NFKB1P19838 AC138035.3-201ENST00000622706 2791 ntBASIC16.04■□□□□ 0.16
NFKB1P19838 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.03■□□□□ 0.16
NFKB1P19838 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.03■□□□□ 0.16
NFKB1P19838 C18orf15-201ENST00000623680 2534 ntBASIC16.03■□□□□ 0.16
NFKB1P19838 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.03■□□□□ 0.16
NFKB1P19838 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.03■□□□□ 0.16
NFKB1P19838 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.03■□□□□ 0.16
NFKB1P19838 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.03■□□□□ 0.16
NFKB1P19838 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.03■□□□□ 0.16
NFKB1P19838 AC025048.3-201ENST00000590609 569 ntBASIC16.03■□□□□ 0.16
NFKB1P19838 AC005702.4-201ENST00000618393 416 ntBASIC16.03■□□□□ 0.16
NFKB1P19838 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.03■□□□□ 0.16
NFKB1P19838 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.03■□□□□ 0.16
NFKB1P19838 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NFKB1P19838 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.03■□□□□ 0.16
NFKB1P19838 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NFKB1P19838 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.02■□□□□ 0.16
NFKB1P19838 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.02■□□□□ 0.16
NFKB1P19838 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NFKB1P19838 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NFKB1P19838 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NFKB1P19838 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms