Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 U82695.1-201ENST00000635752 1889 ntBASIC18.89■□□□□ 0.61
NCLP19338 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 AC108073.2-201ENST00000464002 357 ntBASIC18.89■□□□□ 0.61
NCLP19338 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.89■□□□□ 0.61
NCLP19338 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.89■□□□□ 0.61
NCLP19338 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NCLP19338 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NCLP19338 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NCLP19338 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 AC092919.2-201ENST00000623631 1645 ntBASIC18.89■□□□□ 0.61
NCLP19338 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NCLP19338 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 MRPL20P1-201ENST00000400819 433 ntBASIC18.88■□□□□ 0.61
NCLP19338 MIR1233-2-201ENST00000408138 82 ntBASIC18.88■□□□□ 0.61
NCLP19338 MIR1233-1-201ENST00000408722 82 ntBASIC18.88■□□□□ 0.61
NCLP19338 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NCLP19338 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.88■□□□□ 0.61
NCLP19338 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.88■□□□□ 0.61
NCLP19338 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.88■□□□□ 0.61
NCLP19338 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.88■□□□□ 0.61
NCLP19338 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 TMBIM7P-203ENST00000641617 1718 ntBASIC18.88■□□□□ 0.61
NCLP19338 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NCLP19338 AC087481.3-201ENST00000602886 1894 ntBASIC18.88■□□□□ 0.61
NCLP19338 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.88■□□□□ 0.61
NCLP19338 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NCLP19338 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NCLP19338 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 AC104581.4-201ENST00000623126 3052 ntBASIC18.87■□□□□ 0.61
NCLP19338 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.87■□□□□ 0.61
NCLP19338 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.87■□□□□ 0.61
NCLP19338 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.87■□□□□ 0.61
NCLP19338 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCLP19338 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.87■□□□□ 0.61
NCLP19338 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
NCLP19338 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NCLP19338 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.86■□□□□ 0.61
NCLP19338 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCLP19338 YBX2P1-201ENST00000394192 760 ntBASIC18.86■□□□□ 0.61
NCLP19338 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.86■□□□□ 0.61
NCLP19338 CRYGEP-201ENST00000412192 528 ntBASIC18.86■□□□□ 0.61
NCLP19338 KRT18P2-201ENST00000447938 1258 ntBASIC18.86■□□□□ 0.61
NCLP19338 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms