Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.28■□□□□ 0.84
MS4A1P11836 AC023141.5-201ENST00000458585 616 ntBASIC20.28■□□□□ 0.84
MS4A1P11836 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
MS4A1P11836 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.28■□□□□ 0.84
MS4A1P11836 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.28■□□□□ 0.84
MS4A1P11836 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MS4A1P11836 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MS4A1P11836 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.28■□□□□ 0.84
MS4A1P11836 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MS4A1P11836 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A1P11836 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
MS4A1P11836 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MS4A1P11836 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.27■□□□□ 0.84
MS4A1P11836 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 SPDYE7P-202ENST00000420373 878 ntBASIC20.27■□□□□ 0.84
MS4A1P11836 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.27■□□□□ 0.84
MS4A1P11836 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.27■□□□□ 0.84
MS4A1P11836 AC026150.2-201ENST00000564693 1156 ntBASIC20.27■□□□□ 0.84
MS4A1P11836 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
MS4A1P11836 AC003101.2-201ENST00000612557 442 ntBASIC20.27■□□□□ 0.84
MS4A1P11836 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.27■□□□□ 0.84
MS4A1P11836 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A1P11836 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A1P11836 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MS4A1P11836 SPDYE14P-201ENST00000442619 822 ntBASIC20.26■□□□□ 0.83
MS4A1P11836 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 BANF1P1-201ENST00000553684 263 ntBASIC20.26■□□□□ 0.83
MS4A1P11836 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.26■□□□□ 0.83
MS4A1P11836 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
MS4A1P11836 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.26■□□□□ 0.83
MS4A1P11836 AP001059.3-201ENST00000619053 235 ntBASIC20.26■□□□□ 0.83
MS4A1P11836 AC068587.6-202ENST00000641839 5619 ntBASIC20.26■□□□□ 0.83
MS4A1P11836 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 AC106881.1-201ENST00000605849 3329 ntBASIC20.26■□□□□ 0.83
MS4A1P11836 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
MS4A1P11836 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A1P11836 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MS4A1P11836 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A1P11836 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms