Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 TP53TG3HP-202ENST00000569755 579 ntBASIC18.53■□□□□ 0.56
TOP1P11387 AL607033.1-201ENST00000623900 1599 ntBASIC18.53■□□□□ 0.56
TOP1P11387 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 AL603832.2-201ENST00000566195 2125 ntBASIC18.53■□□□□ 0.56
TOP1P11387 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TOP1P11387 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.53■□□□□ 0.56
TOP1P11387 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.53■□□□□ 0.56
TOP1P11387 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TOP1P11387 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
TOP1P11387 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.52■□□□□ 0.56
TOP1P11387 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.52■□□□□ 0.56
TOP1P11387 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TOP1P11387 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.52■□□□□ 0.56
TOP1P11387 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.52■□□□□ 0.56
TOP1P11387 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.52■□□□□ 0.56
TOP1P11387 AC112504.1-201ENST00000623415 1841 ntBASIC18.52■□□□□ 0.56
TOP1P11387 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.52■□□□□ 0.56
TOP1P11387 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.52■□□□□ 0.56
TOP1P11387 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.52■□□□□ 0.56
TOP1P11387 AC140912.1-201ENST00000577171 1054 ntBASIC18.52■□□□□ 0.56
TOP1P11387 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.52■□□□□ 0.56
TOP1P11387 CHCHD2P3-201ENST00000603038 451 ntBASIC18.52■□□□□ 0.56
TOP1P11387 AC099568.2-201ENST00000609194 695 ntBASIC18.52■□□□□ 0.56
TOP1P11387 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
TOP1P11387 AC025048.6-201ENST00000634326 1161 ntBASIC18.52■□□□□ 0.56
TOP1P11387 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TOP1P11387 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TOP1P11387 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TOP1P11387 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.52■□□□□ 0.55
TOP1P11387 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.52■□□□□ 0.55
TOP1P11387 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TOP1P11387 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.51■□□□□ 0.55
TOP1P11387 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 AP005018.1-201ENST00000525475 301 ntBASIC18.51■□□□□ 0.55
TOP1P11387 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
TOP1P11387 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TOP1P11387 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 PKD1P5-201ENST00000532415 10291 ntBASIC18.51■□□□□ 0.55
TOP1P11387 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.51■□□□□ 0.55
TOP1P11387 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
TOP1P11387 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TOP1P11387 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.5■□□□□ 0.55
TOP1P11387 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TOP1P11387 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.5■□□□□ 0.55
TOP1P11387 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TOP1P11387 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms