Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 NORAD-201ENST00000565493 5339 ntBASIC13.61□□□□□ -0.23
ACAA1P09110 AC007191.1-201ENST00000623179 2995 ntBASIC13.61□□□□□ -0.23
ACAA1P09110 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.61□□□□□ -0.23
ACAA1P09110 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ACAA1P09110 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ACAA1P09110 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ACAA1P09110 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.6□□□□□ -0.23
ACAA1P09110 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.6□□□□□ -0.23
ACAA1P09110 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ACAA1P09110 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 AL627223.1-201ENST00000416693 442 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.6□□□□□ -0.23
ACAA1P09110 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 AL139010.1-201ENST00000454878 894 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 RNA5SP410-201ENST00000516285 106 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.6□□□□□ -0.23
ACAA1P09110 SLC25A39P2-201ENST00000537614 270 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.6□□□□□ -0.23
ACAA1P09110 SNHG9-202ENST00000564014 471 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ACAA1P09110 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ACAA1P09110 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
ACAA1P09110 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.6□□□□□ -0.23
ACAA1P09110 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.6□□□□□ -0.23
ACAA1P09110 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.59□□□□□ -0.23
ACAA1P09110 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.59□□□□□ -0.23
ACAA1P09110 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.59□□□□□ -0.23
ACAA1P09110 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.59□□□□□ -0.23
ACAA1P09110 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
ACAA1P09110 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 AP3S2-216ENST00000617003 1561 ntBASIC13.59□□□□□ -0.23
ACAA1P09110 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.59□□□□□ -0.23
ACAA1P09110 CR383656.2-201ENST00000548656 2254 ntBASIC13.59□□□□□ -0.23
ACAA1P09110 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ACAA1P09110 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.59□□□□□ -0.23
ACAA1P09110 KRT18P32-201ENST00000424695 1287 ntBASIC13.59□□□□□ -0.23
ACAA1P09110 CNN2P11-201ENST00000429351 262 ntBASIC13.59□□□□□ -0.23
ACAA1P09110 EEF1DP4-201ENST00000446006 880 ntBASIC13.59□□□□□ -0.23
ACAA1P09110 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ACAA1P09110 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.59□□□□□ -0.23
ACAA1P09110 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.59□□□□□ -0.23
ACAA1P09110 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.59□□□□□ -0.23
ACAA1P09110 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms