Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 INTS4P2-202ENST00000614726 2019 ntBASIC14.86□□□□□ -0.03
CTSBP07858 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 AC022188.1-201ENST00000620960 1664 ntBASIC14.86□□□□□ -0.03
CTSBP07858 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 MSTO2P-201ENST00000314835 1709 ntBASIC14.86□□□□□ -0.03
CTSBP07858 AC007950.2-201ENST00000615045 2347 ntBASIC14.86□□□□□ -0.03
CTSBP07858 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CTSBP07858 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 AC079776.1-201ENST00000401540 1152 ntBASIC14.85□□□□□ -0.03
CTSBP07858 AC112492.5-201ENST00000421897 457 ntBASIC14.85□□□□□ -0.03
CTSBP07858 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 AC011495.1-201ENST00000498085 584 ntBASIC14.85□□□□□ -0.03
CTSBP07858 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.85□□□□□ -0.03
CTSBP07858 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 AC008735.3-201ENST00000596646 500 ntBASIC14.85□□□□□ -0.03
CTSBP07858 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 AC133539.2-201ENST00000604757 467 ntBASIC14.85□□□□□ -0.03
CTSBP07858 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 CU634019.7-201ENST00000624153 1185 ntBASIC14.85□□□□□ -0.03
CTSBP07858 FP236241.2-201ENST00000624906 1185 ntBASIC14.85□□□□□ -0.03
CTSBP07858 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.85□□□□□ -0.03
CTSBP07858 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.85□□□□□ -0.03
CTSBP07858 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTSBP07858 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.85□□□□□ -0.03
CTSBP07858 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.85□□□□□ -0.03
CTSBP07858 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 DRD5P1-201ENST00000456605 1438 ntBASIC14.84□□□□□ -0.03
CTSBP07858 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.84□□□□□ -0.03
CTSBP07858 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CTSBP07858 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.84□□□□□ -0.03
CTSBP07858 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.84□□□□□ -0.03
CTSBP07858 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.84□□□□□ -0.03
CTSBP07858 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.84□□□□□ -0.03
CTSBP07858 AC134915.1-201ENST00000426461 574 ntBASIC14.84□□□□□ -0.03
CTSBP07858 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSBP07858 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.84□□□□□ -0.03
CTSBP07858 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.84□□□□□ -0.03
CTSBP07858 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSBP07858 AC120045.2-201ENST00000567334 178 ntBASIC14.84□□□□□ -0.03
CTSBP07858 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.84□□□□□ -0.03
CTSBP07858 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.84□□□□□ -0.03
CTSBP07858 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CTSBP07858 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms