Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HLA-DQB2P05538 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AC126177.1-201ENST00000547829 2218 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 MRPS18AP1-201ENST00000414458 589 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AC015922.1-201ENST00000421102 1152 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AC114501.2-201ENST00000439631 535 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.97■□□□□ 0.15
HLA-DQB2P05538 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQB2P05538 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 AC112693.3-201ENST00000624819 1983 ntBASIC15.96■□□□□ 0.15
HLA-DQB2P05538 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HLA-DQB2P05538 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQB2P05538 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AC104640.1-201ENST00000562617 2109 ntBASIC15.95■□□□□ 0.14
HLA-DQB2P05538 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AL512638.1-201ENST00000457493 794 ntBASIC15.95■□□□□ 0.14
HLA-DQB2P05538 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms