Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL1A1P02452 AP005117.1-202ENST00000581724 1908 ntBASIC18.69■□□□□ 0.58
COL1A1P02452 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.69■□□□□ 0.58
COL1A1P02452 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL1A1P02452 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL1A1P02452 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.69■□□□□ 0.58
COL1A1P02452 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL1A1P02452 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.68■□□□□ 0.58
COL1A1P02452 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.68■□□□□ 0.58
COL1A1P02452 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
COL1A1P02452 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 AL365203.3-201ENST00000609742 2057 ntBASIC18.68■□□□□ 0.58
COL1A1P02452 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.68■□□□□ 0.58
COL1A1P02452 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.68■□□□□ 0.58
COL1A1P02452 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.68■□□□□ 0.58
COL1A1P02452 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.68■□□□□ 0.58
COL1A1P02452 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.68■□□□□ 0.58
COL1A1P02452 ECM1P1-201ENST00000604092 1279 ntBASIC18.68■□□□□ 0.58
COL1A1P02452 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.68■□□□□ 0.58
COL1A1P02452 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.68■□□□□ 0.58
COL1A1P02452 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL1A1P02452 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.68■□□□□ 0.58
COL1A1P02452 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
COL1A1P02452 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL1A1P02452 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.67■□□□□ 0.58
COL1A1P02452 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.67■□□□□ 0.58
COL1A1P02452 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.67■□□□□ 0.58
COL1A1P02452 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.67■□□□□ 0.58
COL1A1P02452 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.67■□□□□ 0.58
COL1A1P02452 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 AC091271.1-201ENST00000611877 1162 ntBASIC18.67■□□□□ 0.58
COL1A1P02452 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.67■□□□□ 0.58
COL1A1P02452 PRSS30P-206ENST00000641773 873 ntBASIC18.67■□□□□ 0.58
COL1A1P02452 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COL1A1P02452 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
COL1A1P02452 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
COL1A1P02452 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
COL1A1P02452 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL1A1P02452 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL1A1P02452 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.66■□□□□ 0.58
COL1A1P02452 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 EIF3FP3-201ENST00000434851 1086 ntBASIC18.66■□□□□ 0.58
COL1A1P02452 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.66■□□□□ 0.58
COL1A1P02452 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.66■□□□□ 0.58
COL1A1P02452 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 AC023310.1-201ENST00000554836 735 ntBASIC18.66■□□□□ 0.58
COL1A1P02452 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.66■□□□□ 0.58
COL1A1P02452 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
COL1A1P02452 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.66■□□□□ 0.58
COL1A1P02452 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 AL158070.2-201ENST00000623713 1621 ntBASIC18.66■□□□□ 0.58
COL1A1P02452 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
COL1A1P02452 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL1A1P02452 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms