Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 AC020907.1-201ENST00000616460 1350 ntBASIC16.54■□□□□ 0.24
C1RP00736 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
C1RP00736 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 PFN1P12-201ENST00000455938 534 ntBASIC16.54■□□□□ 0.24
C1RP00736 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.54■□□□□ 0.24
C1RP00736 FTH1P14-201ENST00000482930 551 ntBASIC16.54■□□□□ 0.24
C1RP00736 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.54■□□□□ 0.24
C1RP00736 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.54■□□□□ 0.24
C1RP00736 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.54■□□□□ 0.24
C1RP00736 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.54■□□□□ 0.24
C1RP00736 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.54■□□□□ 0.24
C1RP00736 AC015910.1-201ENST00000579400 975 ntBASIC16.54■□□□□ 0.24
C1RP00736 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 MIR6787-201ENST00000616675 61 ntBASIC16.54■□□□□ 0.24
C1RP00736 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.54■□□□□ 0.24
C1RP00736 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 AL607033.1-201ENST00000623900 1599 ntBASIC16.54■□□□□ 0.24
C1RP00736 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
C1RP00736 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
C1RP00736 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
C1RP00736 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
C1RP00736 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.53■□□□□ 0.24
C1RP00736 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.53■□□□□ 0.24
C1RP00736 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.53■□□□□ 0.24
C1RP00736 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.53■□□□□ 0.24
C1RP00736 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 KRT90P-201ENST00000549264 1064 ntBASIC16.53■□□□□ 0.24
C1RP00736 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.53■□□□□ 0.24
C1RP00736 MIR4538-201ENST00000581377 78 ntBASIC16.53■□□□□ 0.24
C1RP00736 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.53■□□□□ 0.24
C1RP00736 AP005019.2-201ENST00000615104 511 ntBASIC16.53■□□□□ 0.24
C1RP00736 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 AC134407.2-201ENST00000625089 1978 ntBASIC16.53■□□□□ 0.24
C1RP00736 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
C1RP00736 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
C1RP00736 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C1RP00736 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
C1RP00736 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.52■□□□□ 0.24
C1RP00736 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.52■□□□□ 0.24
C1RP00736 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C1RP00736 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
C1RP00736 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C1RP00736 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
C1RP00736 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C1RP00736 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
C1RP00736 AC046158.3-201ENST00000624947 2558 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms