Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CPNE6O95741 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
CPNE6O95741 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CPNE6O95741 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.51■□□□□ 0.07
CPNE6O95741 RN7SL752P-201ENST00000463779 287 ntBASIC15.51■□□□□ 0.07
CPNE6O95741 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.51■□□□□ 0.07
CPNE6O95741 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE6O95741 CHCHD2P3-201ENST00000603038 451 ntBASIC15.51■□□□□ 0.07
CPNE6O95741 AC007431.3-201ENST00000623221 587 ntBASIC15.51■□□□□ 0.07
CPNE6O95741 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.51■□□□□ 0.07
CPNE6O95741 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CPNE6O95741 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPNE6O95741 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE6O95741 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.51■□□□□ 0.07
CPNE6O95741 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPNE6O95741 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 CYP4F24P-201ENST00000586049 1580 ntBASIC15.5■□□□□ 0.07
CPNE6O95741 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 POU5F1P6-201ENST00000466990 990 ntBASIC15.5■□□□□ 0.07
CPNE6O95741 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CPNE6O95741 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.5■□□□□ 0.07
CPNE6O95741 AL359881.2-201ENST00000602973 570 ntBASIC15.5■□□□□ 0.07
CPNE6O95741 AC099568.2-201ENST00000609194 695 ntBASIC15.5■□□□□ 0.07
CPNE6O95741 AC074044.1-201ENST00000609673 707 ntBASIC15.5■□□□□ 0.07
CPNE6O95741 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CPNE6O95741 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPNE6O95741 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CPNE6O95741 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CPNE6O95741 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 TCAF2P1-201ENST00000291129 2421 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CPNE6O95741 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 AL136982.4-201ENST00000437689 1740 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 AP005117.1-202ENST00000581724 1908 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms