Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GFRA3O60609 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA3O60609 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA3O60609 GHSR-202ENST00000427970 912 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 EIF2S2P3-201ENST00000428356 999 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.09■□□□□ 0.01
GFRA3O60609 RPL18AP3-201ENST00000462885 528 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC130709.1-201ENST00000484779 1212 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC026410.1-201ENST00000507366 1101 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA3O60609 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
GFRA3O60609 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 AL160314.3-201ENST00000556041 767 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC016180.1-201ENST00000567945 403 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.09■□□□□ 0.01
GFRA3O60609 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.09■□□□□ 0.01
GFRA3O60609 AL391001.1-201ENST00000602747 715 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC005632.3-201ENST00000605544 308 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 AC006158.1-201ENST00000610661 249 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 AL391256.1-201ENST00000443260 1855 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.09■□□□□ 0.01
GFRA3O60609 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.09■□□□□ 0.01
GFRA3O60609 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 FAM90A2P-201ENST00000511144 1395 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 FAM90A25P-201ENST00000528404 1395 ntBASIC15.09■□□□□ 0.01
GFRA3O60609 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFRA3O60609 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.09■□□□□ 0.01
GFRA3O60609 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFRA3O60609 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFRA3O60609 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.08■□□□□ 0.01
GFRA3O60609 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFRA3O60609 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
GFRA3O60609 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.08■□□□□ 0
GFRA3O60609 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.08■□□□□ 0
GFRA3O60609 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.08■□□□□ 0
GFRA3O60609 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GFRA3O60609 BAK1P1-201ENST00000317045 636 ntBASIC15.08■□□□□ 0
GFRA3O60609 SNX15-201ENST00000352068 771 ntTSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 OR2K2-202ENST00000374428 1038 ntBASIC15.08■□□□□ 0
GFRA3O60609 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.08■□□□□ 0
GFRA3O60609 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.08■□□□□ 0
GFRA3O60609 PHKG1P2-201ENST00000457537 863 ntBASIC15.08■□□□□ 0
GFRA3O60609 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.08■□□□□ 0
GFRA3O60609 AL391280.1-201ENST00000506969 1062 ntBASIC15.08■□□□□ 0
GFRA3O60609 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.08■□□□□ 0
GFRA3O60609 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.08■□□□□ 0
GFRA3O60609 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.08■□□□□ 0
GFRA3O60609 AC073911.3-201ENST00000624401 631 ntBASIC15.08■□□□□ 0
GFRA3O60609 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.08■□□□□ 0
GFRA3O60609 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GFRA3O60609 GGT4P-201ENST00000623672 1708 ntBASIC15.08■□□□□ 0
GFRA3O60609 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.08■□□□□ 0
GFRA3O60609 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.08■□□□□ 0
GFRA3O60609 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.08■□□□□ 0
GFRA3O60609 PCGF3-213ENST00000620529 1899 ntBASIC15.08■□□□□ 0
GFRA3O60609 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GFRA3O60609 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 REXO1L1P-202ENST00000608646 1974 ntBASIC15.07■□□□□ 0
GFRA3O60609 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
GFRA3O60609 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
GFRA3O60609 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.07■□□□□ 0
GFRA3O60609 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.07■□□□□ 0
GFRA3O60609 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.07■□□□□ 0
GFRA3O60609 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.07■□□□□ 0
GFRA3O60609 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms