Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC007950.2-201ENST00000615045 2347 ntBASIC16.35■□□□□ 0.21
MSI1O43347 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MSI1O43347 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MSI1O43347 LINC00554-201ENST00000564841 3011 ntBASIC16.35■□□□□ 0.21
MSI1O43347 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 AC092850.2-201ENST00000623821 2697 ntBASIC16.34■□□□□ 0.21
MSI1O43347 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
MSI1O43347 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
MSI1O43347 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 AC087499.6-201ENST00000411576 835 ntBASIC16.34■□□□□ 0.21
MSI1O43347 TOMM22P5-201ENST00000416399 439 ntBASIC16.34■□□□□ 0.21
MSI1O43347 MEP1AP4-201ENST00000423244 1087 ntBASIC16.34■□□□□ 0.21
MSI1O43347 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.34■□□□□ 0.21
MSI1O43347 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.34■□□□□ 0.21
MSI1O43347 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.34■□□□□ 0.21
MSI1O43347 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.34■□□□□ 0.21
MSI1O43347 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 AL391825.1-201ENST00000457671 1364 ntBASIC16.34■□□□□ 0.21
MSI1O43347 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MSI1O43347 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MSI1O43347 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MSI1O43347 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
MSI1O43347 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.33■□□□□ 0.21
MSI1O43347 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
MSI1O43347 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MSI1O43347 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
MSI1O43347 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.33■□□□□ 0.2
MSI1O43347 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.33■□□□□ 0.2
MSI1O43347 DGCR5-201ENST00000399539 862 ntBASIC16.33■□□□□ 0.2
MSI1O43347 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 MYCLP2-201ENST00000449268 967 ntBASIC16.33■□□□□ 0.2
MSI1O43347 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MSI1O43347 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.33■□□□□ 0.2
MSI1O43347 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.33■□□□□ 0.2
MSI1O43347 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.33■□□□□ 0.2
MSI1O43347 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.33■□□□□ 0.2
MSI1O43347 AC099568.2-201ENST00000609194 695 ntBASIC16.33■□□□□ 0.2
MSI1O43347 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 AL121723.1-201ENST00000445194 1519 ntBASIC16.33■□□□□ 0.2
MSI1O43347 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MSI1O43347 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms