Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
DDX39AO00148 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.71■□□□□ 0.43
DDX39AO00148 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.71■□□□□ 0.43
DDX39AO00148 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.71■□□□□ 0.43
DDX39AO00148 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DDX39AO00148 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DDX39AO00148 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DDX39AO00148 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.71■□□□□ 0.42
DDX39AO00148 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.71■□□□□ 0.42
DDX39AO00148 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DDX39AO00148 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 TOMM22P5-201ENST00000416399 439 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX39AO00148 KRT17P7-201ENST00000451704 1104 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 FAM86LP-201ENST00000478302 853 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX39AO00148 RRP7BP-205ENST00000566851 833 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 AC132938.2-201ENST00000579188 680 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX39AO00148 WFDC1-204ENST00000613603 549 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.7■□□□□ 0.42
DDX39AO00148 AL591163.1-201ENST00000641757 987 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 CICP13-201ENST00000422015 2789 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.7■□□□□ 0.42
DDX39AO00148 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DDX39AO00148 AC063926.2-201ENST00000623766 1308 ntBASIC17.7■□□□□ 0.42
DDX39AO00148 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DDX39AO00148 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms