Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NPIPB4C9JG80 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AL844908.2-201ENST00000609461 460 ntBASIC13.92□□□□□ -0.18
NPIPB4C9JG80 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 BTBD7P1-201ENST00000447253 1453 ntBASIC13.92□□□□□ -0.18
NPIPB4C9JG80 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 FER1L4-210ENST00000615531 5998 ntBASIC13.92□□□□□ -0.18
NPIPB4C9JG80 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NPIPB4C9JG80 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AC023024.2-201ENST00000623561 1993 ntBASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AC104457.1-201ENST00000401024 814 ntBASIC13.91□□□□□ -0.18
NPIPB4C9JG80 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AC027369.6-201ENST00000525520 931 ntBASIC13.91□□□□□ -0.18
NPIPB4C9JG80 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AC092337.1-201ENST00000568699 1129 ntBASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 AC000095.1-201ENST00000603208 874 ntBASIC13.91□□□□□ -0.18
NPIPB4C9JG80 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms