Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMEM88BA6NKF7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 RN7SL258P-201ENST00000478664 300 ntBASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 AC130709.1-201ENST00000484779 1212 ntBASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 RN7SL67P-201ENST00000492147 296 ntBASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMEM88BA6NKF7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 FAM90A2P-201ENST00000511144 1395 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 FAM90A25P-201ENST00000528404 1395 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 OR2K2-202ENST00000374428 1038 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 AL645937.2-201ENST00000396808 931 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 EIF3FP3-201ENST00000434851 1086 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 SAMD11P1-201ENST00000571429 661 ntBASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.96■□□□□ 0.47
TMEM88BA6NKF7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM88BA6NKF7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.96■□□□□ 0.46
TMEM88BA6NKF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM88BA6NKF7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TMEM88BA6NKF7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 PP12613-201ENST00000424958 2230 ntBASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AC009779.1-201ENST00000551138 283 ntBASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms