Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 BNIP3P1-202ENST00000550043 1585 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 KRT18P67-201ENST00000432816 1264 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 EMBP1-201ENST00000458200 901 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 AC010507.1-201ENST00000633895 436 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 AC148477.4-201ENST00000613430 1793 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV5A0A0B4J249 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AC005089.1-201ENST00000619486 2241 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AL359258.3-201ENST00000622910 2331 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AC023024.2-201ENST00000623561 1993 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AL049840.3-201ENST00000602669 611 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AL121912.1-201ENST00000603683 238 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 AC232323.1-201ENST00000540724 2099 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 REXO1L5P-201ENST00000622260 2098 ntBASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV5A0A0B4J249 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms