Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AC025580.3-201ENST00000617932 1424 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 AC010327.5-201ENST00000586923 3061 ntBASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
R3HCC1Q9Y3T6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 AC087641.1-201ENST00000557561 1021 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MIR3687-2-201ENST00000577708 61 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MIR4515-201ENST00000584082 81 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 ACTL9-202ENST00000612068 1252 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MIR3687-1-201ENST00000614492 61 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 AC131009.4-201ENST00000624048 1740 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 AC005252.3-201ENST00000623855 2258 ntBASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
R3HCC1Q9Y3T6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TMBIM7P-203ENST00000641617 1718 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.18■□□□□ 0.5
R3HCC1Q9Y3T6 DNAJB3-201ENST00000446806 729 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms