Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
COPS3Q9UNS2 HLA-A-201ENST00000376802 1334 ntBASIC14.15□□□□□ -0.15
COPS3Q9UNS2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.15□□□□□ -0.15
COPS3Q9UNS2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
COPS3Q9UNS2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 AC009078.2-202ENST00000463353 338 ntBASIC14.14□□□□□ -0.15
COPS3Q9UNS2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 AC243562.2-201ENST00000561247 970 ntBASIC14.14□□□□□ -0.15
COPS3Q9UNS2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 REXO1L1P-202ENST00000608646 1974 ntBASIC14.14□□□□□ -0.15
COPS3Q9UNS2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
COPS3Q9UNS2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC127383.1-201ENST00000444697 1800 ntBASIC14.13□□□□□ -0.15
COPS3Q9UNS2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC106881.1-201ENST00000605849 3329 ntBASIC14.13□□□□□ -0.15
COPS3Q9UNS2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC098859.1-201ENST00000502915 1238 ntBASIC14.13□□□□□ -0.15
COPS3Q9UNS2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms