Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP25Q9UHP3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
USP25Q9UHP3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.16■□□□□ 0.5
USP25Q9UHP3 AC068587.6-202ENST00000641839 5619 ntBASIC18.16■□□□□ 0.5
USP25Q9UHP3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
USP25Q9UHP3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 AL138918.1-201ENST00000568306 659 ntBASIC18.15■□□□□ 0.5
USP25Q9UHP3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 AC008267.7-201ENST00000624570 1194 ntBASIC18.15■□□□□ 0.5
USP25Q9UHP3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.15■□□□□ 0.5
USP25Q9UHP3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP25Q9UHP3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC18.14■□□□□ 0.5
USP25Q9UHP3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.14■□□□□ 0.5
USP25Q9UHP3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
USP25Q9UHP3 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC009090.5-201ENST00000624886 2285 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 SLC25A1P1-201ENST00000528351 927 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC061975.2-201ENST00000581722 295 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC005912.2-201ENST00000619492 2400 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 AC232323.1-201ENST00000540724 2099 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 REXO1L5P-201ENST00000622260 2098 ntBASIC18.14■□□□□ 0.49
USP25Q9UHP3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
USP25Q9UHP3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
USP25Q9UHP3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms