Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 ACTBP11-201ENST00000436287 1126 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 SLC25A47P1-201ENST00000531577 414 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 AC036164.1-201ENST00000570544 333 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 AC018665.1-201ENST00000622927 1362 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 KRT8P22-201ENST00000562317 1415 ntBASIC16.1■□□□□ 0.17
EBF1Q9UH73 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 ACTG1P3-201ENST00000431775 1114 ntBASIC16.09■□□□□ 0.17
EBF1Q9UH73 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 AC133539.2-201ENST00000604757 467 ntBASIC16.09■□□□□ 0.17
EBF1Q9UH73 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EBF1Q9UH73 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EBF1Q9UH73 AC092384.3-202ENST00000564646 2873 ntBASIC16.09■□□□□ 0.17
EBF1Q9UH73 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.08■□□□□ 0.17
EBF1Q9UH73 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
EBF1Q9UH73 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
EBF1Q9UH73 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 AC078925.2-201ENST00000624013 1973 ntBASIC16.08■□□□□ 0.16
EBF1Q9UH73 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
EBF1Q9UH73 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 AL583810.1-201ENST00000553344 1045 ntBASIC16.08■□□□□ 0.16
EBF1Q9UH73 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.08■□□□□ 0.16
EBF1Q9UH73 LINC01115-203ENST00000606068 577 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms